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/** |
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$Id$ |
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Copyright (C) 2008 Nicklas Nordborg |
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This file is part of BASE - BioArray Software Environment. |
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Available at http://base.thep.lu.se/ |
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BASE is free software; you can redistribute it and/or |
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modify it under the terms of the GNU General Public License |
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as published by the Free Software Foundation; either version 3 |
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of the License, or (at your option) any later version. |
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BASE is distributed in the hope that it will be useful, |
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but WITHOUT ANY WARRANTY; without even the implied warranty of |
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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GNU General Public License for more details. |
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You should have received a copy of the GNU General Public License |
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along with BASE. If not, see <http://www.gnu.org/licenses/>. |
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*/ |
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package net.sf.basedb.util.overview.loader; |
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import net.sf.basedb.core.ArrayBatch; |
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import net.sf.basedb.core.ArrayDesign; |
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import net.sf.basedb.core.ArraySlide; |
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import net.sf.basedb.core.DbControl; |
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import net.sf.basedb.core.Item; |
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import net.sf.basedb.core.ItemQuery; |
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import net.sf.basedb.core.ItemResultIterator; |
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import net.sf.basedb.core.PermissionDeniedException; |
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import net.sf.basedb.util.overview.OverviewContext; |
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import net.sf.basedb.util.overview.node.ChildNodeDirection; |
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import net.sf.basedb.util.overview.node.NameableNameGenerator; |
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import net.sf.basedb.util.overview.Node; |
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import net.sf.basedb.util.overview.node.NodeFactory; |
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/** |
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Node loader implementation for array batches. The forward-loading |
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direction goes from {@link ArrayDesign}:s -> {@link ArrayBatch}:s -> |
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{@link ArraySlide}:s. The reverse-loading direction is the opposite |
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direction. |
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|
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@author Nicklas |
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@version 2.10 |
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@base.modified $Date$ |
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*/ |
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public class ArrayBatchLoader |
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extends BasicItemNodeLoader<ArrayBatch> |
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{ |
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public ArrayBatchLoader() |
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{ |
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super(Item.ARRAYBATCH, ALLOW_ROOT_NODE, |
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new NameableNameGenerator<ArrayBatch>("batch", "Array batch")); |
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} |
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|
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/* |
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From the NodeLoader interface |
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------------------------------ |
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*/ |
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/** |
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Create forward-loading array batch nodes from a given array design node. |
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The returned node is a folder-type node containing item nodes for |
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each batch that has been created from the array design. |
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@return The folder node for the array batches |
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*/ |
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@Override |
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public Node createForwardNode(DbControl dc, OverviewContext context, Node designNode) |
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{ |
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NodeFactory<ArrayBatch> nf = getNodeFactory(dc, context); |
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Node folderNode = null; |
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ArrayDesign design = (ArrayDesign)designNode.getItem(dc); |
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ItemQuery<ArrayBatch> query = context.initQuery(design.getArrayBatches(), "name"); |
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ItemResultIterator<ArrayBatch> it = query.iterate(dc); |
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while (it.hasNext()) |
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{ |
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ArrayBatch batch = it.next(); |
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if (folderNode == null) |
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{ |
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folderNode = new Node("batches", "Batches", designNode, ChildNodeDirection.FORWARD); |
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} |
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createItemNode(nf, batch, batch, false, folderNode, ChildNodeDirection.FORWARD); |
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} |
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postValidateFolder(nf, folderNode, designNode, false); |
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return folderNode; |
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} |
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|
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/** |
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Create a reverse-loading array batch node from an array slide node. |
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@return An array batch node, or null if the slide doesn't belong to a batch |
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*/ |
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@Override |
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public Node createReverseNode(DbControl dc, OverviewContext context, Node slideNode) |
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{ |
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NodeFactory<ArrayBatch> nf = getNodeFactory(dc, context); |
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ArrayBatch batch = null; |
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boolean denied = false; |
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try |
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{ |
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batch = ((ArraySlide)slideNode.getItem(dc)).getArrayBatch(); |
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} |
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catch (PermissionDeniedException ex) |
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{ |
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denied = true; |
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} |
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Node batchNode = createItemNode(nf, batch, batch, denied, |
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slideNode, ChildNodeDirection.REVERSE); |
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return batchNode; |
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} |
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// -------------------------------- |
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/* |
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From the AbstractNodeLoader class |
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---------------------------------- |
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*/ |
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/** |
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Loads property nodes of an array batch. |
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<ul> |
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<li>Annotations: {@link AnnotationLoader#createPropertyNode(DbControl, OverviewContext, Node)} |
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<li>Protocol: {@link ProtocolLoader#createPropertyNode(DbControl, OverviewContext, Node)} |
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<li>Print robot: {@link HardwareLoader#createPropertyNode(DbControl, OverviewContext, Node)} |
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</ul> |
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*/ |
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@Override |
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protected void loadPropertyChildNodes(DbControl dc, OverviewContext context, Node batchNode) |
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{ |
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getNodeLoader(context, Item.ANNOTATION).createPropertyNode(dc, context, batchNode); |
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getNodeLoader(context, Item.PROTOCOL).createPropertyNode(dc, context, batchNode); |
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getNodeLoader(context, Item.HARDWARE).createPropertyNode(dc, context, batchNode); |
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getNodeLoader(context, Item.ANYTOANY).createPropertyNode(dc, context, batchNode); |
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} |
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|
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/** |
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Loads the array slide nodes that is related to the given batch node. |
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@see ArraySlideLoader#createForwardNode(DbControl, OverviewContext, Node) |
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*/ |
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@Override |
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protected void loadForwardChildNodes(DbControl dc, OverviewContext context, Node batchNode) |
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{ |
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getNodeLoader(context, Item.ARRAYSLIDE).createForwardNode(dc, context, batchNode); |
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} |
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|
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/** |
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Loads the array design node that is the parent of this array batch. |
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@see ArrayDesignLoader#createReverseNode(DbControl, OverviewContext, Node) |
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*/ |
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@Override |
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protected void loadReverseChildNodes(DbControl dc, OverviewContext context, Node batchNode) |
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{ |
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getNodeLoader(context, Item.ARRAYDESIGN).createReverseNode(dc, context, batchNode); |
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} |
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// --------------------------------------- |
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|
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} |