LikelihoodRatioTestBinomial.h

#ifndef _theplu_yat_statistics_loglikelihood_ratio_test_binomial
#define _theplu_yat_statistics_loglikelihood_ratio_test_binomial

// $Id: LikelihoodRatioTestBinomial.h 3138 2013-11-29 02:07:58Z peter $

/*
  Copyright (C) 2013 Peter Johansson

  This file is part of the yat library, http://dev.thep.lu.se/yat

  The yat library is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License as
  published by the Free Software Foundation; either version 3 of the
  License, or (at your option) any later version.

  The yat library is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
  General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with yat. If not, see <http://www.gnu.org/licenses/>.
*/

#include "yat/utility/Matrix.h"

namespace theplu {
namespace yat {
namespace statistics {

  class LikelihoodRatioTestBinomial
  {
  public:
    LikelihoodRatioTestBinomial(size_t n=2);

    void add(size_t population, bool positive, long int n=1);

    unsigned long int n(void) const;

    unsigned long int n(size_t i) const;

    unsigned long int negative(void) const;

    unsigned long int negative(size_t i) const;

    unsigned long int positive(void) const;

    unsigned long int positive(size_t i) const;

    size_t size(void) const;

    double llr(void) const;

  private:
    utility::Matrix count_;
  };

}}} // of namespace theplu yat statistics

#endif