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data (svndigest:ignore) |
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yat-hello |
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Makefile |
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Makefile.am |
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README |
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Suite.cc |
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Suite.h |
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alignment.cc |
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bam.cc |
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bam_header.cc |
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bam_iterator.cc |
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bam_multi_region_iterator.cc |
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bam_pair.cc |
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bam_pair_analyse.cc |
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bam_pair_buffer.cc |
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bam_pair_iterator.cc |
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bam_pair_iterator2.cc |
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bam_read_filter.cc |
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bam_read_sequence_iterator.cc |
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bam_region_iterator.cc |
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binary_read_write.cc |
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chi2.cc |
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cholesky_decomposer.cc |
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cigar.cc |
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cigar2.cc |
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cigar_iterator.cc |
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cmd_test.sh |
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codon.cc |
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commandline.cc |
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concept.cc |
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consensus_inputranker.cc |
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copy_k_of_n.cc |
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cox.cc |
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crossvalidation.cc |
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data_lookup_1d.cc |
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data_weight.cc |
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data_weight_proxy.cc |
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defs.sh.in |
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deleter.cc |
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diagonal_matrix.cc |
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distance.cc |
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doxygen_test.sh |
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ensemble.cc |
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fasta.cc |
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feature_selection.cc |
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fileutil.cc |
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fisher.cc |
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gaussian_mixture.cc |
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gen_libmy_shared.sh |
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gen_libmy_static.sh |
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genomic_position.cc |
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getline_iterator.cc |
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getvector.cc |
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gff.cc |
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gsl_error_handler.cc |
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help_test.sh |
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histogram.cc |
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igp.cc |
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index.cc |
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init.sh |
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inputranker.cc |
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interpolation.cc |
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inverse_svd.cc |
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is_sorted_until.cc |
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iterator.cc |
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kalman_filter.cc |
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kaplan_meier.cc |
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kendall.cc |
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kernel.cc |
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kernel_lookup.cc |
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kernel_matrix.cc |
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kernel_pca.cc |
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knn.cc |
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kolmogorov_smirnov.cc |
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large_file.cc |
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libbam.cc |
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likelihood.cc |
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likelihood_ratio_test_binomial.cc |
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ln_pdf.cc |
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mAligner.cc |
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matrix.cc |
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matrix_expression.cc |
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matrix_lookup.cc |
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matrix_lookup_weighted.cc |
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matrix_view.cc |
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matrix_weighted.cc |
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merge.cc |
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merge_iterator.cc |
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minimizer.cc |
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msmith_waterman2.cc |
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multiminimizer.cc |
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multiminimizerderivative.cc |
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multiprocess.cc |
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multivariate.cc |
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multivariate_gaussian.cc |
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nbc.cc |
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ncc.cc |
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needleman_wunsch.cc |
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needleman_wunsch2.cc |
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negative_binomial.cc |
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negative_binomial_extended_mixture.cc |
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negative_binomial_mixture.cc |
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nni.cc |
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normalization.cc |
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ostream_iterator.cc |
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pca.cc |
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1 (5%) |
4 (28%) |
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pca2.cc |
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percentile_confidence_interval.cc |
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perceptron.cc |
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pileup.cc |
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poisson.cc |
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poisson_mixture.cc |
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print_what.cc |
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priority_queue.cc |
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queue.cc |
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queue3.cc |
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random_shuffle.cc |
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random_shuffle.sh |
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range.cc |
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ranking.cc |
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regression.cc |
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rnd.cc |
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1 (4%) |
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rng-mt.cc |
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roc.cc |
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root_finder.cc |
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root_finder_derivative.cc |
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round.cc |
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scheduler.cc |
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scheduler2.cc |
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scheduler3.cc |
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scheduler6.cc |
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scheduler7.cc |
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scheduler8.cc |
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scheduler9.cc |
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score.cc |
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segment.cc |
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shuffle.cc |
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smart_ptr.cc |
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smith_waterman.cc |
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smoother.cc |
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spearman.cc |
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split.cc |
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statistics.cc |
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stdopt.cc |
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stream_redirect.cc |
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subset_generator.cc |
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svd.cc |
5 (2%) |
1 (0%) |
1 (4%) |
3 (10%) |
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svm.cc |
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svm_multi_class.cc |
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target.cc |
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ttest.cc |
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tukey.cc |
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unity_scaler.cc |
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utility.cc |
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vcf.cc |
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vcf_compare.cc |
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vcf_file.cc |
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vcf_file2.cc |
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vcf_file3.cc |
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vcf_header.cc |
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vector.cc |
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vector_expression.cc |
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version.cc |
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version_option_test.sh |
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view.cc |
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weighted_iterator_archetype.cc |
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yat_ac_write_to_file_test.sh |
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yat_am_local_test.sh |
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yat_config_cblas_test.sh |
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yat_config_test.sh |
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3855 |
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yat_cpp_add_flag_test.sh |
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yat_cxx_add_flag_test.sh |
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yat_have_svn_wc_test.sh |
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3999 |
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yat_header_assert_test.sh |
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3855 |
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yat_ld_add_flag_test.sh |
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yat_lt_compile_ifelse_test.sh |
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yat_lt_link_ifelse_test.sh |
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yat_lt_link_la_ifelse_test.sh |
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3855 |
peter |
yat_m4_test.sh |
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yat_m4_test2.sh |
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yat_m4_with_bam_test.sh |
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yat_msg_error_test.sh |
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yat_msg_error_test2.sh |
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3330 |
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yat_pc_test.sh |
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4019 |
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yat_prog_move_if_change_test.sh |
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4359 |
peter |
yat_revision_header_test.sh |
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0 |
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3855 |
peter |
yat_svn_release_year_test.sh |
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yat_svn_revision_test.sh |
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yat_svn_timestamp_test.sh |
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4323 |
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yat_use_libtool_tag_test.sh |
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0 |
0 |
3330 |
peter |
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20 (0%) |
8 (0%) |
3 (0%) |
9 (0%) |
4384 |
peter |