Course book
Biological Physics: Energy, Information, Life. Philip Nelson. W H Freeman, updated 1st edition (2007).
The lectures covers chapters 1-9 roughly in the following way:Chapt 1: Carl Troein
Chapt 2-6: Bo Söderberg
Chapt 7 & 9: Stefan Wallin
Chapt 8: Henrik Jönsson
The remaining chapters (10-12) are used as a basis for student seminar presentations.
Other good textbooks on theoretical biophysics
Physical Biology of the Cell. Rob Philipps, Jane Kondev, Julie Theriot. Garland Science (2008).
Molecular and Cellular Biophysics. Meyer B Jackson. Cambridge University Press (2006).