Here is a list of all documented class members with links to the class documentation for each member:

- c -

• C() : theplu::yat::classifier::SVM , theplu::yat::classifier::SvmMultiClass
• calculate_distances() : theplu::yat::utility::NNI
• ccc() : theplu::yat::statistics::AveragerPair
• central_moment3() : theplu::yat::statistics::averager_base3< Derived >
• central_moment4() : theplu::yat::statistics::averager_base4< Derived >
• Centralizer() : theplu::yat::normalizer::Centralizer< UnaryFunction >
• centroids() : theplu::yat::classifier::NCC< Distance >
• Chi2() : theplu::yat::statistics::Fisher
• chisq() : theplu::yat::regression::MultiDimensional , theplu::yat::regression::MultiDimensionalWeighted , theplu::yat::regression::OneDimensional
• chisq_ : theplu::yat::regression::OneDimensional , theplu::yat::regression::OneDimensionalWeighted
• chromosome() : theplu::yat::omic::GenomicPosition
• cigar() : theplu::yat::omic::BamRead , theplu::yat::utility::Aligner , theplu::yat::utility::SmithWaterman
• cigar_op() : theplu::yat::omic::BamRead , theplu::yat::omic::Pileup< Iterator >::Entry
• cigar_oplen() : theplu::yat::omic::BamRead , theplu::yat::omic::Pileup< Iterator >::Entry
• cigar_str() : theplu::yat::omic::BamRead
• CigarIterator() : theplu::yat::utility::CigarIterator< BASE >
• classes() : theplu::yat::classifier::Target
• classifier() : theplu::yat::classifier::EnsembleBuilder< Classifier, Data >
• classifier_type : theplu::yat::classifier::EnsembleBuilder< Classifier, Data >
• clear() : theplu::yat::utility::Aligner::Cigar , theplu::yat::utility::SegmentTree< Container, Compare, Value2Key >
• close() : theplu::yat::omic::BamFile< Derived >
• cm2_ : theplu::yat::statistics::averager_base2< Derived >
• cm3_ : theplu::yat::statistics::averager_base3< Derived >
• cm4_ : theplu::yat::statistics::averager_base4< Derived >
• cmd() : theplu::yat::utility::Option
• cmd_error() : theplu::yat::utility::cmd_error
• Codon() : theplu::yat::omic::Codon
• column_const_view() : theplu::yat::utility::Matrix
• column_iterator : theplu::yat::utility::Mutable_Container2D< T > , theplu::yat::utility::Matrix , theplu::yat::utility::MatrixWeighted
• column_view() : theplu::yat::utility::Matrix
• ColumnNormalizer() : theplu::yat::normalizer::ColumnNormalizer< T >
• columns() : theplu::yat::classifier::KernelLookup , theplu::yat::classifier::MatrixLookup , theplu::yat::classifier::MatrixLookupWeighted , theplu::yat::utility::KernelMatrix< RandomAccessRange1, RandomAccessRange2, BinaryFunctor > , theplu::yat::utility::Matrix , theplu::yat::utility::MatrixWeighted
• ColumnStream() : theplu::yat::utility::ColumnStream
• CommandLine() : theplu::yat::utility::CommandLine
• compare() : theplu::yat::utility::Segment< T, Compare >
• compare_3way() : theplu::yat::utility::Segment< T, Compare >
• complement() : theplu::yat::omic::DNA
• compose_f_gx() : theplu::yat::utility::compose_f_gx< F, G >
• compose_f_gx_hx() : theplu::yat::utility::compose_f_gx_hx< F, G, H >
• compose_f_gx_hy() : theplu::yat::utility::compose_f_gx_hy< F, G, H >
• compose_f_gxy() : theplu::yat::utility::compose_f_gxy< F, G >
• ConsensusInputRanker() : theplu::yat::classifier::ConsensusInputRanker
• const_column_iterator : theplu::yat::classifier::KernelLookup , theplu::yat::classifier::MatrixLookupWeighted , theplu::yat::utility::Container2D< T > , theplu::yat::utility::KernelMatrix< RandomAccessRange1, RandomAccessRange2, BinaryFunctor > , theplu::yat::utility::MatrixWeighted , theplu::yat::classifier::MatrixLookup , theplu::yat::utility::Matrix
• const_iterator : theplu::yat::utility::KernelMatrix< RandomAccessRange1, RandomAccessRange2, BinaryFunctor > , theplu::yat::classifier::DataLookup1D , theplu::yat::classifier::DataLookupWeighted1D , theplu::yat::classifier::MatrixLookup , theplu::yat::classifier::MatrixLookupWeighted , theplu::yat::omic::Fasta::Sequence , theplu::yat::utility::VectorBase , theplu::yat::utility::Aligner::Cigar , theplu::yat::utility::Container2D< T > , theplu::yat::utility::Index , theplu::yat::utility::MatrixWeighted , theplu::yat::utility::Matrix , theplu::yat::utility::SegmentTree< Container, Compare, Value2Key > , theplu::yat::classifier::KernelLookup , theplu::yat::omic::Pileup< Iterator >
• const_reference : theplu::yat::classifier::MatrixLookup , theplu::yat::utility::SegmentTree< Container, Compare, Value2Key > , theplu::yat::utility::Matrix , theplu::yat::utility::KernelMatrix< RandomAccessRange1, RandomAccessRange2, BinaryFunctor > , theplu::yat::classifier::KernelLookup , theplu::yat::classifier::DataLookup1D , theplu::yat::classifier::DataLookupWeighted1D , theplu::yat::classifier::MatrixLookupWeighted , theplu::yat::utility::MatrixWeighted , theplu::yat::utility::VectorBase , theplu::yat::utility::Container2D< T >
• const_row_iterator : theplu::yat::utility::Container2D< T > , theplu::yat::utility::MatrixWeighted , theplu::yat::classifier::MatrixLookupWeighted , theplu::yat::utility::KernelMatrix< RandomAccessRange1, RandomAccessRange2, BinaryFunctor > , theplu::yat::classifier::KernelLookup , theplu::yat::utility::Matrix , theplu::yat::classifier::MatrixLookup
• const_vec_ : theplu::yat::utility::VectorBase
• Container2D() : theplu::yat::utility::Container2D< T >
• Container2DIterator() : theplu::yat::utility::Container2DIterator< Container, value, reference >
• container_ : theplu::yat::utility::SegmentTree< Container, Compare, Value2Key >
• Continuous() : theplu::yat::random::Continuous
• ContinuousGeneral() : theplu::yat::random::ContinuousGeneral
• convert() : theplu::yat::classifier::DataLookup1D , theplu::yat::classifier::DataLookupWeighted1D
• core() : theplu::yat::omic::BamRead
• correlation() : theplu::yat::statistics::AveragerPair , theplu::yat::statistics::AveragerPairWeighted
• count() : theplu::yat::utility::SegmentTree< Container, Compare, Value2Key >
• covariance() : theplu::yat::statistics::AveragerPairWeighted , theplu::yat::statistics::AveragerPair , theplu::yat::regression::Polynomial , theplu::yat::regression::MultiDimensional
• CrossValidationSampler() : theplu::yat::classifier::CrossValidationSampler
• CSplineInterpolation() : theplu::yat::regression::CSplineInterpolation
• CSplinePeriodicInterpolation() : theplu::yat::regression::CSplinePeriodicInterpolation
• cv() : theplu::yat::statistics::averager_base2< Derived >